They dont “cooperate with governments”, they follow the laws they legally have to. All the cases I can think of where they gave info to a government with a legal order to do so, they gave information that has to be logged in order for the system to work and the subjects themselves used poor opsec eg: their real names for accounts and recovery emails…

Some privacy extremists have unrealistic expectations when they sign up to these things without fully understanding how it works and then blame the provider for something they were completely transparent about from the beginning.

From reading that article it looks like they were only using and able to log the IP address when the person logged in to their protonmail account specifically - not VPN.

They even state that VPNs can not be forced to log under the same legal order and are treated differently so in this case it seems the activists were not using the VPN while accessing their emails.

Although I dont agree with even the logging of the email IP, it appears like the user shot themselves in the foot like that other case where someone used their real name in the username and that obviosly has to be logged in some way.